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Zhixi Tian
About Zhixi Tian
Research Summary
Selected Publications
 
  Location :Home > Faculty > Zhixi Tian > Selected Publications
 Selected Publications 

1. Zhou, Z. , Wang, Z. , Li, W. , Fang, C., Shen, Y., Li, C., Wu, Y., and Tian, Z.(2013). Comprehensive
    analyses of microRNA genes evolution in paleopolyploid soybean genome. The Plant Journal
    DOI:10.1111/tpj.12293, in press

2. Fang, C., Li, W., Li, G., Wang, Z., Zhou, Z., Ma, Y., Shen, Y., Li, C., Wu, Y., Zhu, B., et al. (2013). Cloning 
 of  Ln Gene Through Combined Approach of Map-based Cloning and Association Study in Soybean.
 Journal of Genetics and Genomics 40, 93-96.

3. Tian, Z., Zhao, M., She, M., Du, J., Cannon, S.B., Liu, X., Xu, X., Qi, X., Li, M.W., Lam, H.M., et al.
  (2012). Genome-Wide Characterization of Nonreference Transposons Reveals Evolutionary Propensities of
  Transposons in Soybean. The Plant Cell  24, 4422-4436.

4. Du, J., Tian, Z., Sui, Y., Zhao, M., Song, Q., Cannon, S.B., Cregan, P., and Ma, J. (2012). Pericentromeric
    effects shape the patterns of divergence, retention, and expression of duplicated genes in the Paleopolyploid
    Soybean. The Plant Cell 24, 21-32.

5. Yan, C.J., Tian, Z.X., Fang, Y.W., Yang, Y.C., Li, J., Zeng, S.Y., Gu, S.L., Xu, C.W., Tang, S.Z., and
 Gu, M.H. (2011). Genetic analysis of starch paste viscosity parameters in glutinous rice (Oryza sativa L.).
 Theoretical and Applied Genetics 122, 63-76.

6. Tian, Z., Yu, Y., Lin, F., Yu, Y., Sanmiguel, P.J., Wing, R.A., McCouch, S.R., Ma, J., and Jackson, S.A.
  (2011). Exceptional lability of a genomic complex in rice and its close relatives revealed by interspecific and
  intraspecific comparison and population analysis. BMC Genomics 12, 142.

7. Gao, Z., Zeng, D., Cheng, F., Tian, Z., Guo, L., Su, Y., Yan, M., Jiang, H., Dong, G., Huang, Y., et al.
 (2011). ALK, the key gene for gelatinization temperature, is a modifier gene for gel consistency in rice.
 Journal of  Integrative Plant Biology 53, 756-765.

8. Tian, Z., Yan, C., Qian, Q., Yan, S., Xie, H., Wang, F., Xu, J., Liu, G., Wang, Y., Liu, Q., et al. (2010).
 Development of gene-tagged molecular markers for starch synthesis-related genes in rice.
Chinese Science
 Bulletin
55, 3768-3777.

9. Tian, Z., Wang, X., Lee, R., Li, Y., Specht, J.E., Nelson, R.L., McClean, P.E., Qiu, L., and Ma, J. (2010).
 Artificial selection for determinate growth habit in soybean.
Proceedings of the National Academy of
 Sciences
107, 8563-8568.

10. Schmutz, J., Cannon, S.B., Schlueter, J., Ma, J., Mitros, T., Nelson, W., Hyten, D.L., Song, Q., Thelen, J.J.,
 Cheng, J., et al. (2010). Genome sequence of the palaeopolyploid soybean. Nature 463, 178-183.

11. Du, J., Tian, Z., Hans, C.S., Laten, H.M., Cannon, S.B., Jackson, S.A., Shoemaker, R.C., and Ma, J. (2010).
  Evolutionary conservation, diversity and specificity of LTR-retrotransposons in flowering plants: insights
  from genome-wide analysis and multi-specific comparison. The Plant Journal 63, 584-598.

12. Du, J., Tian, Z., Bowen, N.J., Schmutz, J., Shoemaker, R.C., and Ma, J. (2010). Bifurcation and
  enhancement of autonomous-nonautonomous retrotransposon partnership through LTR Swapping in
  soybean. The Plant cell 22, 48-61.

13. Du, J., Grant, D., Tian, Z., Nelson, R., Zhu, L., Shoemaker, R., and Ma, J. (2010). SoyTEdb: a
  comprehensive database of transposable elements in the soybean genome. BMC Genomics 11, 113.

14. Wu, J., Fujisawa, M., Tian, Z., Yamagata, H., Kamiya, K., Shibata, M., Hosokawa, S., Ito, Y., Hamada,
  M., Katagiri, S., et al. (2009). Comparative analysis of complete orthologous centromeres from two subspecies
  of rice reveals rapid variation of centromere organization and structure. The Plant Journal 60, 805-819.

15. Tian, Z., Rizzon, C., Du, J., Zhu, L., Bennetzen, J.L., Jackson, S.A., Gaut, B.S., and Ma, J. (2009). Do 
  genetic recombination and gene density shape the pattern of DNA elimination in rice long terminal repeat
  retrotransposons? Genome Research 19, 2221-2230.

16. Tian, Z., Qian, Q., Liu, Q., Yan, M., Liu, X., Yan, C., Liu, G., Gao, Z., Tang, S., Zeng, D., et al. (2009).
  Allelic diversities in rice starch biosynthesis lead to a diverse array of rice eating and cooking qualities.
  Proceedings of the National Academy of Sciences 106, 21760-21765.
 
 
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